Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.41■□□□□ 0.06
KDM4BO94953 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.4■□□□□ 0.06
KDM4BO94953 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.4■□□□□ 0.06
KDM4BO94953 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
KDM4BO94953 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.4■□□□□ 0.06
KDM4BO94953 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.4■□□□□ 0.06
KDM4BO94953 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.4■□□□□ 0.06
KDM4BO94953 ECEL1P2-202ENST00000465689 757 ntBASIC15.4■□□□□ 0.06
KDM4BO94953 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.4■□□□□ 0.06
KDM4BO94953 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.4■□□□□ 0.06
KDM4BO94953 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 AC132938.6-201ENST00000623828 1655 ntBASIC15.4■□□□□ 0.06
KDM4BO94953 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.4■□□□□ 0.06
KDM4BO94953 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KDM4BO94953 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.4■□□□□ 0.06
KDM4BO94953 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KDM4BO94953 LINC00304-203ENST00000565008 1864 ntBASIC15.4■□□□□ 0.06
KDM4BO94953 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 AC008741.2-201ENST00000612792 3115 ntBASIC15.39■□□□□ 0.05
KDM4BO94953 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KDM4BO94953 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.39■□□□□ 0.05
KDM4BO94953 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 DUTP2-201ENST00000519164 463 ntBASIC15.39■□□□□ 0.05
KDM4BO94953 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.39■□□□□ 0.05
KDM4BO94953 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.39■□□□□ 0.05
KDM4BO94953 MIR3917-201ENST00000580971 93 ntBASIC15.39■□□□□ 0.05
KDM4BO94953 AC092865.7-201ENST00000641832 219 ntBASIC15.39■□□□□ 0.05
KDM4BO94953 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.39■□□□□ 0.05
KDM4BO94953 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.39■□□□□ 0.05
KDM4BO94953 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KDM4BO94953 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.39■□□□□ 0.05
KDM4BO94953 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
KDM4BO94953 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
KDM4BO94953 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KDM4BO94953 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms