Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RASA4DP-201ENST00000460726 1199 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 PRELID1P1-202ENST00000567272 903 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 MIR3652-201ENST00000579335 131 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.55■□□□□ 0.4
RFPL1O75677 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 AL136038.4-201ENST00000603606 1261 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 NPAP1P7-201ENST00000613027 823 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 PCDHB19P-201ENST00000570871 2371 ntBASIC17.55■□□□□ 0.4
RFPL1O75677 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.55■□□□□ 0.4
RFPL1O75677 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.55■□□□□ 0.4
RFPL1O75677 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFPL1O75677 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.54■□□□□ 0.4
RFPL1O75677 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RFPL1O75677 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.54■□□□□ 0.4
RFPL1O75677 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 SLC25A1P3-201ENST00000395415 828 ntBASIC17.54■□□□□ 0.4
RFPL1O75677 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 SPDYE13P-201ENST00000445314 798 ntBASIC17.54■□□□□ 0.4
RFPL1O75677 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.54■□□□□ 0.4
RFPL1O75677 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.54■□□□□ 0.4
RFPL1O75677 AL139327.4-201ENST00000612362 153 ntBASIC17.54■□□□□ 0.4
RFPL1O75677 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.54■□□□□ 0.4
RFPL1O75677 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.54■□□□□ 0.4
RFPL1O75677 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.54■□□□□ 0.4
RFPL1O75677 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFPL1O75677 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RFPL1O75677 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFPL1O75677 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 AC018695.7-201ENST00000624587 2492 ntBASIC17.53■□□□□ 0.4
RFPL1O75677 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFPL1O75677 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 TSPY12P-201ENST00000421279 868 ntBASIC17.53■□□□□ 0.4
RFPL1O75677 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.53■□□□□ 0.4
RFPL1O75677 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.53■□□□□ 0.4
RFPL1O75677 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFPL1O75677 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 AC005915.1-201ENST00000624912 2018 ntBASIC17.53■□□□□ 0.4
RFPL1O75677 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RFPL1O75677 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFPL1O75677 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RFPL1O75677 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RFPL1O75677 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
RFPL1O75677 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms