Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFS3O75489 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFS3O75489 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFS3O75489 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NDUFS3O75489 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NDUFS3O75489 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NDUFS3O75489 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NDUFS3O75489 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.44■□□□□ 0.38
NDUFS3O75489 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.44■□□□□ 0.38
NDUFS3O75489 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.44■□□□□ 0.38
NDUFS3O75489 AC019129.2-201ENST00000609837 1235 ntBASIC17.44■□□□□ 0.38
NDUFS3O75489 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 AC016396.2-201ENST00000562575 1417 ntBASIC17.44■□□□□ 0.38
NDUFS3O75489 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.44■□□□□ 0.38
NDUFS3O75489 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFS3O75489 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NDUFS3O75489 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NDUFS3O75489 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NDUFS3O75489 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NDUFS3O75489 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 AP000867.3-201ENST00000524675 377 ntBASIC17.43■□□□□ 0.38
NDUFS3O75489 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.43■□□□□ 0.38
NDUFS3O75489 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.43■□□□□ 0.38
NDUFS3O75489 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NDUFS3O75489 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFS3O75489 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
NDUFS3O75489 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 NSUN5P1-202ENST00000421140 1535 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 NSUN5P2-203ENST00000457352 1529 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.42■□□□□ 0.38
NDUFS3O75489 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.42■□□□□ 0.38
NDUFS3O75489 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.42■□□□□ 0.38
NDUFS3O75489 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.42■□□□□ 0.38
NDUFS3O75489 AC074051.2-201ENST00000565115 352 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.42■□□□□ 0.38
NDUFS3O75489 AC011467.2-201ENST00000598425 242 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDUFS3O75489 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
NDUFS3O75489 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 TP73-AS1-210ENST00000637775 1455 ntBASIC17.42■□□□□ 0.38
NDUFS3O75489 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms