Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPF40AO75400 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRPF40AO75400 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 RNF216P1-203ENST00000404404 2427 ntBASIC20.36■□□□□ 0.85
PRPF40AO75400 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PRPF40AO75400 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPF40AO75400 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPF40AO75400 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRPF40AO75400 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
PRPF40AO75400 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 AC092171.3-201ENST00000610122 2651 ntBASIC20.35■□□□□ 0.85
PRPF40AO75400 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.35■□□□□ 0.85
PRPF40AO75400 AC005521.1-201ENST00000393351 872 ntBASIC20.35■□□□□ 0.85
PRPF40AO75400 HMGA1P5-201ENST00000412453 271 ntBASIC20.35■□□□□ 0.85
PRPF40AO75400 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 RN7SL850P-201ENST00000579959 291 ntBASIC20.35■□□□□ 0.85
PRPF40AO75400 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
PRPF40AO75400 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PRPF40AO75400 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.35■□□□□ 0.85
PRPF40AO75400 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.35■□□□□ 0.85
PRPF40AO75400 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRPF40AO75400 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.34■□□□□ 0.85
PRPF40AO75400 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
PRPF40AO75400 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 AC113347.1-201ENST00000413321 391 ntBASIC20.34■□□□□ 0.85
PRPF40AO75400 TMPOP1-202ENST00000424642 1267 ntBASIC20.34■□□□□ 0.85
PRPF40AO75400 ECEL1P2-202ENST00000465689 757 ntBASIC20.34■□□□□ 0.85
PRPF40AO75400 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.34■□□□□ 0.85
PRPF40AO75400 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PRPF40AO75400 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.34■□□□□ 0.85
PRPF40AO75400 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PRPF40AO75400 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.34■□□□□ 0.85
PRPF40AO75400 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.34■□□□□ 0.85
PRPF40AO75400 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PRPF40AO75400 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PRPF40AO75400 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRPF40AO75400 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 AC092053.1-201ENST00000605787 1936 ntBASIC20.33■□□□□ 0.85
PRPF40AO75400 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRPF40AO75400 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRPF40AO75400 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRPF40AO75400 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 INGX-201ENST00000359239 846 ntBASIC20.33■□□□□ 0.85
PRPF40AO75400 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PRPF40AO75400 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.33■□□□□ 0.85
PRPF40AO75400 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.33■□□□□ 0.85
PRPF40AO75400 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.33■□□□□ 0.85
PRPF40AO75400 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRPF40AO75400 SLC25A3P1-201ENST00000443844 931 ntBASIC20.33■□□□□ 0.85
PRPF40AO75400 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms