Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MTSS1O43312 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.87■□□□□ 0.45
MTSS1O43312 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MTSS1O43312 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MTSS1O43312 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MTSS1O43312 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
MTSS1O43312 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MTSS1O43312 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 AC003669.1-201ENST00000334569 611 ntBASIC17.86■□□□□ 0.45
MTSS1O43312 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
MTSS1O43312 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 DUSP5P1-201ENST00000441325 1139 ntBASIC17.86■□□□□ 0.45
MTSS1O43312 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.86■□□□□ 0.45
MTSS1O43312 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
MTSS1O43312 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.86■□□□□ 0.45
MTSS1O43312 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
MTSS1O43312 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.86■□□□□ 0.45
MTSS1O43312 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MTSS1O43312 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTSS1O43312 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MTSS1O43312 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.85■□□□□ 0.45
MTSS1O43312 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
MTSS1O43312 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.85■□□□□ 0.45
MTSS1O43312 INTS4P1-201ENST00000438455 1935 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.85■□□□□ 0.45
MTSS1O43312 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.85■□□□□ 0.45
MTSS1O43312 AC096582.2-201ENST00000510860 516 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.85■□□□□ 0.45
MTSS1O43312 AC074051.2-201ENST00000565115 352 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 BNIP3P18-201ENST00000593976 575 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.85■□□□□ 0.45
MTSS1O43312 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
MTSS1O43312 AC114341.1-201ENST00000618070 349 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
MTSS1O43312 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MTSS1O43312 AD001527.2-201ENST00000622994 785 ntBASIC17.85■□□□□ 0.45
MTSS1O43312 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MTSS1O43312 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.84■□□□□ 0.45
MTSS1O43312 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.84■□□□□ 0.45
MTSS1O43312 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
MTSS1O43312 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.84■□□□□ 0.45
MTSS1O43312 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
MTSS1O43312 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.84■□□□□ 0.45
MTSS1O43312 AL450487.1-201ENST00000426799 995 ntBASIC17.84■□□□□ 0.45
MTSS1O43312 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.84■□□□□ 0.45
MTSS1O43312 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
MTSS1O43312 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.84■□□□□ 0.45
MTSS1O43312 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MTSS1O43312 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTSS1O43312 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms