Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CEP290O15078 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.71■□□□□ 0.59
CEP290O15078 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.71■□□□□ 0.58
CEP290O15078 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.71■□□□□ 0.58
CEP290O15078 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.71■□□□□ 0.58
CEP290O15078 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.71■□□□□ 0.58
CEP290O15078 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CEP290O15078 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CEP290O15078 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.7■□□□□ 0.58
CEP290O15078 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CEP290O15078 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CEP290O15078 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.7■□□□□ 0.58
CEP290O15078 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.7■□□□□ 0.58
CEP290O15078 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.7■□□□□ 0.58
CEP290O15078 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CEP290O15078 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 AL161938.1-201ENST00000569833 2180 ntBASIC18.7■□□□□ 0.58
CEP290O15078 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEP290O15078 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CEP290O15078 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 SLC7A15P-201ENST00000424028 1363 ntBASIC18.69■□□□□ 0.58
CEP290O15078 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 AC099548.2-209ENST00000480264 625 ntBASIC18.69■□□□□ 0.58
CEP290O15078 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CEP290O15078 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 SPDYE12P-201ENST00000618416 771 ntBASIC18.69■□□□□ 0.58
CEP290O15078 AL161645.1-201ENST00000622716 1255 ntBASIC18.69■□□□□ 0.58
CEP290O15078 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CEP290O15078 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
CEP290O15078 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CEP290O15078 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CEP290O15078 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.68■□□□□ 0.58
CEP290O15078 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 WASH4P-201ENST00000564273 1246 ntBASIC18.68■□□□□ 0.58
CEP290O15078 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.68■□□□□ 0.58
CEP290O15078 AL512343.1-201ENST00000605837 169 ntBASIC18.68■□□□□ 0.58
CEP290O15078 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.68■□□□□ 0.58
CEP290O15078 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CEP290O15078 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.68■□□□□ 0.58
CEP290O15078 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
CEP290O15078 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 AC007541.1-201ENST00000570282 1469 ntBASIC18.68■□□□□ 0.58
CEP290O15078 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.68■□□□□ 0.58
CEP290O15078 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 AC234783.1-201ENST00000441761 496 ntBASIC18.68■□□□□ 0.58
CEP290O15078 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.68■□□□□ 0.58
CEP290O15078 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.68■□□□□ 0.58
CEP290O15078 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.68■□□□□ 0.58
CEP290O15078 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CEP290O15078 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms