Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL391807.1-203ENST00000604392 2365 ntBASIC18.18■□□□□ 0.5
CCDC188H7C350 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC188H7C350 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 AC046158.3-201ENST00000624947 2558 ntBASIC18.18■□□□□ 0.5
CCDC188H7C350 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC188H7C350 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC188H7C350 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC188H7C350 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC188H7C350 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 MYCLP1-201ENST00000372451 1075 ntBASIC18.17■□□□□ 0.5
CCDC188H7C350 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC188H7C350 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC188H7C350 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC188H7C350 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC188H7C350 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC188H7C350 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 KRT17P2-201ENST00000300992 1314 ntBASIC18.17■□□□□ 0.5
CCDC188H7C350 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 RNF216P1-203ENST00000404404 2427 ntBASIC18.17■□□□□ 0.5
CCDC188H7C350 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC188H7C350 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC188H7C350 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC188H7C350 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC188H7C350 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC188H7C350 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC188H7C350 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC188H7C350 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC188H7C350 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ECEL1P2-202ENST00000465689 757 ntBASIC18.16■□□□□ 0.5
CCDC188H7C350 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC188H7C350 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC188H7C350 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC188H7C350 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC188H7C350 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 KRT8P9-201ENST00000558927 1449 ntBASIC18.15■□□□□ 0.5
CCDC188H7C350 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms