Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 MIR940-201ENST00000401276 94 ntBASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 HLA-J-201ENST00000462773 1622 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AC096633.1-201ENST00000422446 749 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AC092910.1-201ENST00000482027 1129 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 KRT18P58-201ENST00000527480 1120 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AC106730.1-201ENST00000566722 1090 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 MTDHP4-201ENST00000600287 670 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 GPALPP1-207ENST00000611650 899 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AP000867.4-201ENST00000641616 219 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 ZNF259P1-201ENST00000407656 1365 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 AC008764.6-201ENST00000595909 2069 ntBASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA2E9PIF3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 AC025062.2-201ENST00000605477 670 ntBASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms