Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 AC010327.5-201ENST00000586923 3061 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 TSPY23P-201ENST00000440136 739 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 RARRES2P6-201ENST00000567333 442 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 OR10C1-204ENST00000622521 1039 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM238C9JI98 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 GMCL1P1-201ENST00000463439 1581 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 MYLKP1-201ENST00000509077 1580 ntBASIC12.35□□□□□ -0.43
TMEM238C9JI98 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM238C9JI98 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 KRT18P55-202ENST00000578578 1546 ntBASIC12.34□□□□□ -0.43
TMEM238C9JI98 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 AC026271.2-201ENST00000428091 497 ntBASIC12.34□□□□□ -0.43
TMEM238C9JI98 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.34□□□□□ -0.43
TMEM238C9JI98 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms