Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI2Q9Y5P3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 AL139327.4-201ENST00000612362 153 ntBASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 IL9RP2-201ENST00000423948 1312 ntBASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RAI2Q9Y5P3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 LYSMD4-203ENST00000378904 2122 ntBASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 MTDHP3-201ENST00000594186 672 ntBASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RAI2Q9Y5P3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 AC003669.1-201ENST00000334569 611 ntBASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 KLF4P1-201ENST00000412782 1185 ntBASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 RBM17P3-201ENST00000417687 1192 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms