Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA7Q9Y5G6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA7Q9Y5G6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA7Q9Y5G6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA7Q9Y5G6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 KRT18P13-201ENST00000400056 1290 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AL031284.1-201ENST00000419297 478 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AC093909.1-201ENST00000504731 1122 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AC114341.1-201ENST00000618070 349 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AL355312.1-201ENST00000407115 2176 ntBASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA7Q9Y5G6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 AC008687.5-201ENST00000593746 558 ntBASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA7Q9Y5G6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA7Q9Y5G6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms