Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGC4Q9Y5F7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 AL356309.3-201ENST00000624132 1934 ntBASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 SPDYE21P-201ENST00000413323 827 ntBASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 FAAHP1-202ENST00000446499 1238 ntBASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 SART3-203ENST00000546611 1184 ntBASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGC4Q9Y5F7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PCDHGC4Q9Y5F7 PP12613-201ENST00000424958 2230 ntBASIC17.64■□□□□ 0.42
PCDHGC4Q9Y5F7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 AL020989.1-201ENST00000422979 469 ntBASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 BX005266.1-201ENST00000473402 457 ntBASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 AC009336.1-201ENST00000608941 1553 ntBASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC4Q9Y5F7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 AC104692.2-201ENST00000603054 253 ntBASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 AC073592.4-201ENST00000623827 446 ntBASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 TP73-AS1-207ENST00000624167 988 ntBASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC4Q9Y5F7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms