Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 AC007967.3-201ENST00000434308 558 ntBASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 AC116353.5-201ENST00000638148 1699 ntBASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIF3AQ9Y2N7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 MYCLP1-201ENST00000372451 1075 ntBASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 AL138831.2-201ENST00000606564 490 ntBASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 AC009053.2-201ENST00000563701 2365 ntBASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 AC106820.2-201ENST00000563775 3264 ntBASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIF3AQ9Y2N7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AD000864.1-201ENST00000624076 2295 ntBASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AL845331.1-201ENST00000424978 1190 ntBASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 KRT8P26-201ENST00000534154 1276 ntBASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AC019129.2-201ENST00000609837 1235 ntBASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 AC124864.1-201ENST00000623408 392 ntBASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIF3AQ9Y2N7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms