Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPIPA1Q9UND3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 KRT18P58-201ENST00000527480 1120 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC021087.4-201ENST00000563761 564 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC106730.1-201ENST00000566722 1090 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC116407.3-201ENST00000623905 1129 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC117500.6-201ENST00000624871 588 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC022898.2-201ENST00000616822 1312 ntBASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA1Q9UND3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 AL356309.3-201ENST00000624132 1934 ntBASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 AC134043.2-201ENST00000624206 2238 ntBASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 RPS2P1-201ENST00000434010 821 ntBASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 POLD2P1-201ENST00000511220 997 ntBASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA1Q9UND3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NPIPA1Q9UND3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms