Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT6Q9ULM6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 DDX43P3-201ENST00000441064 443 ntBASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AF238378.1-201ENST00000526806 358 ntBASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AC116407.2-201ENST00000613639 860 ntBASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT6Q9ULM6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 TPM4P1-201ENST00000436100 807 ntBASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 LINC01711-201ENST00000598340 967 ntBASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT6Q9ULM6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC104692.2-201ENST00000603054 253 ntBASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms