Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC004777.1-201ENST00000624317 287 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL590396.2-201ENST00000636511 1041 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 AL118508.1-201ENST00000613502 2345 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 HLA-J-201ENST00000462773 1622 ntBASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
FOXD4L1Q9NU39 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AC008741.2-201ENST00000612792 3115 ntBASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AC009947.2-201ENST00000444014 672 ntBASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 SEPHS1P7-201ENST00000452995 1177 ntBASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AC020763.2-201ENST00000623155 1255 ntBASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXD4L1Q9NU39 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AC006455.6-201ENST00000426192 893 ntBASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AC116562.4-202ENST00000641738 218 ntBASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXD4L1Q9NU39 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 AC068987.2-201ENST00000565518 896 ntBASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 AC097478.2-201ENST00000610572 514 ntBASIC21.08■□□□□ 0.97
FOXD4L1Q9NU39 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FOXD4L1Q9NU39 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms