Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 AL136038.3-201ENST00000561909 1096 ntBASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 AL390719.2-201ENST00000606993 987 ntBASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
CTPS2Q9NRF8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 AC087388.1-201ENST00000571370 1112 ntBASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 AL121956.5-201ENST00000625261 221 ntBASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.3■□□□□ 0.2
CTPS2Q9NRF8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AC009154.2-201ENST00000621177 724 ntBASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTPS2Q9NRF8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC011676.5-201ENST00000624864 2660 ntBASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC005332.1-201ENST00000577698 1310 ntBASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms