Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 AC010460.3-201ENST00000511359 1579 ntBASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 RN7SL606P-201ENST00000472779 293 ntBASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 AC011498.5-201ENST00000592027 486 ntBASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEUROD4Q9HD90 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AL121761.2-201ENST00000598007 1648 ntBASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC026396.1-201ENST00000419388 421 ntBASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AL450487.1-201ENST00000426799 995 ntBASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC246785.2-201ENST00000432512 513 ntBASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEUROD4Q9HD90 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 AC007967.3-201ENST00000434308 558 ntBASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 FAM86EP-206ENST00000510506 987 ntBASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 IGHV3-52-201ENST00000519770 353 ntBASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 KRT8P26-201ENST00000534154 1276 ntBASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.52■□□□□ 0.24
NEUROD4Q9HD90 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 AC125634.1-201ENST00000438758 1403 ntBASIC16.52■□□□□ 0.23
NEUROD4Q9HD90 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms