Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 AC004817.3-201ENST00000602957 2129 ntBASIC20.61■□□□□ 0.89
RNF41Q9H4P4 AC025062.2-201ENST00000605477 670 ntBASIC20.61■□□□□ 0.89
RNF41Q9H4P4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF41Q9H4P4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 AC018712.1-201ENST00000455767 687 ntBASIC20.6■□□□□ 0.89
RNF41Q9H4P4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 AL662844.1-201ENST00000546340 181 ntBASIC20.6■□□□□ 0.89
RNF41Q9H4P4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF41Q9H4P4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 AL589182.2-201ENST00000619332 1049 ntBASIC20.59■□□□□ 0.89
RNF41Q9H4P4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF41Q9H4P4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms