Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS11Q9H270 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS11Q9H270 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS11Q9H270 RASA4DP-201ENST00000460726 1199 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS11Q9H270 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS11Q9H270 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 AL136038.4-201ENST00000603606 1261 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 AC140113.3-201ENST00000605663 199 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 AC004263.2-201ENST00000617183 678 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 AC079602.3-201ENST00000623931 403 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 AL391807.1-203ENST00000604392 2365 ntBASIC17.62■□□□□ 0.41
VPS11Q9H270 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS11Q9H270 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS11Q9H270 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS11Q9H270 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS11Q9H270 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VPS11Q9H270 AL138966.2-201ENST00000621997 464 ntBASIC17.61■□□□□ 0.41
VPS11Q9H270 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VPS11Q9H270 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VPS11Q9H270 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS11Q9H270 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS11Q9H270 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS11Q9H270 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS11Q9H270 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS11Q9H270 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS11Q9H270 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
VPS11Q9H270 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 KRT18P48-201ENST00000434763 852 ntBASIC17.6■□□□□ 0.41
VPS11Q9H270 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS11Q9H270 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.6■□□□□ 0.41
VPS11Q9H270 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.6■□□□□ 0.41
VPS11Q9H270 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS11Q9H270 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS11Q9H270 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS11Q9H270 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 FLJ38576-201ENST00000623820 2459 ntBASIC17.6■□□□□ 0.41
VPS11Q9H270 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS11Q9H270 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms