Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 NPAP1P7-201ENST00000613027 823 ntBASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 LYSMD4-203ENST00000378904 2122 ntBASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXP3Q9BZS1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 AC024563.2-201ENST00000603282 481 ntBASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 AL691432.3-201ENST00000621860 400 ntBASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 AL157888.1-201ENST00000631930 593 ntBASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXP3Q9BZS1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 AC011498.5-201ENST00000592027 486 ntBASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 AC092329.2-201ENST00000598402 547 ntBASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 AC009154.2-201ENST00000621177 724 ntBASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXP3Q9BZS1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms