Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 RPL37AP1-201ENST00000412502 279 ntBASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 RPL17P11-201ENST00000417593 544 ntBASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 AL512408.1-201ENST00000569378 2000 ntBASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 MYLKP1-201ENST00000509077 1580 ntBASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL25A1Q9BXS0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 HMGA1P7-201ENST00000406908 502 ntBASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AC006033.1-201ENST00000440505 426 ntBASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AC018665.1-201ENST00000622927 1362 ntBASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.47■□□□□ 0.39
COL25A1Q9BXS0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AC087163.2-201ENST00000457299 853 ntBASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 TMEM198B-204ENST00000484016 896 ntBASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AC109462.3-201ENST00000573934 613 ntBASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL25A1Q9BXS0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms