Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 AC092183.1-201ENST00000469884 875 ntBASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 AL356488.2-201ENST00000602755 427 ntBASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RPAP1Q9BWH6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RPAP1Q9BWH6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AC133963.1-201ENST00000504166 1679 ntBASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AC105339.3-201ENST00000560043 636 ntBASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 BX276092.7-203ENST00000637198 1536 ntBASIC21.2■□□□□ 0.98
RPAP1Q9BWH6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 MIR940-201ENST00000401276 94 ntBASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RPAP1Q9BWH6 AC141586.5-201ENST00000624546 2050 ntBASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 SIRPAP1-201ENST00000448467 1770 ntBASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 KRT18P27-201ENST00000427733 1299 ntBASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 PMPCAP1-201ENST00000508114 1576 ntBASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.18■□□□□ 0.98
RPAP1Q9BWH6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 SIGLEC16-201ENST00000599858 1437 ntBASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPAP1Q9BWH6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms