Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 AC104076.2-201ENST00000448912 469 ntBASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 AL359075.1-203ENST00000462729 1002 ntBASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 AC113404.2-201ENST00000507884 177 ntBASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRDL1Q9BU40 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 KRT89P-201ENST00000620027 1478 ntBASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 FAM8A6P-201ENST00000407496 1135 ntBASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 KRT18P48-201ENST00000434763 852 ntBASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 HOMER2P1-201ENST00000455653 964 ntBASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 AC006116.8-202ENST00000587620 1550 ntBASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRDL1Q9BU40 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AL391005.1-201ENST00000623953 2435 ntBASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRDL1Q9BU40 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms