Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS1Q99742 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS1Q99742 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.95■□□□□ 0.14
NPAS1Q99742 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS1Q99742 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS1Q99742 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 AL121772.3-201ENST00000610840 674 ntBASIC15.95■□□□□ 0.14
NPAS1Q99742 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS1Q99742 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
NPAS1Q99742 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.94■□□□□ 0.14
NPAS1Q99742 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 AC005104.2-201ENST00000427818 678 ntBASIC15.94■□□□□ 0.14
NPAS1Q99742 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.94■□□□□ 0.14
NPAS1Q99742 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.94■□□□□ 0.14
NPAS1Q99742 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.94■□□□□ 0.14
NPAS1Q99742 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 AC133963.1-201ENST00000504166 1679 ntBASIC15.94■□□□□ 0.14
NPAS1Q99742 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
NPAS1Q99742 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPAS1Q99742 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS1Q99742 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NPAS1Q99742 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS1Q99742 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS1Q99742 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPAS1Q99742 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 EMBP1-201ENST00000458200 901 ntBASIC15.93■□□□□ 0.14
NPAS1Q99742 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.93■□□□□ 0.14
NPAS1Q99742 KRT126P-201ENST00000549467 1181 ntBASIC15.93■□□□□ 0.14
NPAS1Q99742 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPAS1Q99742 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NPAS1Q99742 AD001527.2-201ENST00000622994 785 ntBASIC15.93■□□□□ 0.14
NPAS1Q99742 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.93■□□□□ 0.14
NPAS1Q99742 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms