Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.06■□□□□ 0.32
SORT1Q99523 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
SORT1Q99523 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.06■□□□□ 0.32
SORT1Q99523 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.06■□□□□ 0.32
SORT1Q99523 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SORT1Q99523 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.06■□□□□ 0.32
SORT1Q99523 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.06■□□□□ 0.32
SORT1Q99523 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SORT1Q99523 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SORT1Q99523 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 AC008894.3-201ENST00000624324 3103 ntBASIC17.05■□□□□ 0.32
SORT1Q99523 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SORT1Q99523 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 IGHGP-201ENST00000390555 1178 ntBASIC17.05■□□□□ 0.32
SORT1Q99523 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SORT1Q99523 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.05■□□□□ 0.32
SORT1Q99523 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.05■□□□□ 0.32
SORT1Q99523 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.05■□□□□ 0.32
SORT1Q99523 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SORT1Q99523 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
SORT1Q99523 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.05■□□□□ 0.32
SORT1Q99523 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.05■□□□□ 0.32
SORT1Q99523 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORT1Q99523 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.05■□□□□ 0.32
SORT1Q99523 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
SORT1Q99523 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.04■□□□□ 0.32
SORT1Q99523 AC026691.1-201ENST00000602502 2017 ntBASIC17.04■□□□□ 0.32
SORT1Q99523 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SORT1Q99523 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 AL162727.3-201ENST00000635661 2787 ntBASIC17.04■□□□□ 0.32
SORT1Q99523 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 COX5BP2-201ENST00000392354 334 ntBASIC17.04■□□□□ 0.32
SORT1Q99523 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.04■□□□□ 0.32
SORT1Q99523 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 SPDYE15P-201ENST00000424157 909 ntBASIC17.04■□□□□ 0.32
SORT1Q99523 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORT1Q99523 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.04■□□□□ 0.32
SORT1Q99523 AC124947.2-201ENST00000547118 1133 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms