Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MUC4Q99102 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MUC4Q99102 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MUC4Q99102 AL671277.2-201ENST00000458060 996 ntBASIC12.8□□□□□ -0.36
MUC4Q99102 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.8□□□□□ -0.36
MUC4Q99102 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.8□□□□□ -0.36
MUC4Q99102 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.8□□□□□ -0.36
MUC4Q99102 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.8□□□□□ -0.36
MUC4Q99102 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 AC139530.3-201ENST00000620344 690 ntBASIC12.8□□□□□ -0.36
MUC4Q99102 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
MUC4Q99102 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MUC4Q99102 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MUC4Q99102 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
MUC4Q99102 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 AC005104.2-201ENST00000427818 678 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 FAM86EP-206ENST00000510506 987 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 PCDHB19P-201ENST00000570871 2371 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.79□□□□□ -0.36
MUC4Q99102 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
MUC4Q99102 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.79□□□□□ -0.36
MUC4Q99102 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.79□□□□□ -0.36
MUC4Q99102 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.79□□□□□ -0.36
MUC4Q99102 RNF126P1-202ENST00000569893 925 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 GPR32P1-201ENST00000601788 811 ntBASIC12.79□□□□□ -0.36
MUC4Q99102 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.79□□□□□ -0.36
MUC4Q99102 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MUC4Q99102 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms