Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 HLA-J-201ENST00000462773 1622 ntBASIC16.56■□□□□ 0.24
COL21A1Q96P44 AL121761.2-201ENST00000598007 1648 ntBASIC16.56■□□□□ 0.24
COL21A1Q96P44 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 AL592071.1-201ENST00000611956 408 ntBASIC16.56■□□□□ 0.24
COL21A1Q96P44 AC124864.1-201ENST00000623408 392 ntBASIC16.56■□□□□ 0.24
COL21A1Q96P44 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
COL21A1Q96P44 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL21A1Q96P44 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 KRT8P47-201ENST00000604727 1398 ntBASIC16.55■□□□□ 0.24
COL21A1Q96P44 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 CROCCP2-202ENST00000412962 2773 ntBASIC16.55■□□□□ 0.24
COL21A1Q96P44 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.55■□□□□ 0.24
COL21A1Q96P44 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL21A1Q96P44 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 KRT18P1-202ENST00000452408 1331 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 MTCL1P1-201ENST00000446207 792 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 RN7SL606P-201ENST00000472779 293 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 AC068472.1-201ENST00000474589 881 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 AC093458.2-201ENST00000623150 629 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms