Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC006116.8-202ENST00000587620 1550 ntBASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AL049757.1-201ENST00000616842 1596 ntBASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AL355877.3-201ENST00000622820 899 ntBASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AD001527.2-201ENST00000622994 785 ntBASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 AP000867.4-201ENST00000641616 219 ntBASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTCHD1Q96NR3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTCHD1Q96NR3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 AC073592.5-201ENST00000624854 528 ntBASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.51■□□□□ 0.23
PTCHD1Q96NR3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SCARNA2-201ENST00000458748 420 ntBASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 AL160237.2-201ENST00000556165 472 ntBASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 LINC00896-202ENST00000609602 2128 ntBASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 AC019129.2-201ENST00000609837 1235 ntBASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD1Q96NR3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms