Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 AL035633.1-201ENST00000406139 838 ntBASIC20.44■□□□□ 0.86
TRIM47Q96LD4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 AC106028.4-201ENST00000614509 607 ntBASIC20.44■□□□□ 0.86
TRIM47Q96LD4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 AC068880.1-201ENST00000507289 2297 ntBASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM47Q96LD4 ESPNP-201ENST00000270691 2015 ntBASIC20.43■□□□□ 0.86
TRIM47Q96LD4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AC093677.2-201ENST00000600169 1863 ntBASIC20.42■□□□□ 0.86
TRIM47Q96LD4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 MIR770-201ENST00000390219 98 ntBASIC20.42■□□□□ 0.86
TRIM47Q96LD4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AC244107.1-201ENST00000442033 332 ntBASIC20.42■□□□□ 0.86
TRIM47Q96LD4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM47Q96LD4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 PRYP5-201ENST00000451909 266 ntBASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AC018845.2-201ENST00000568326 409 ntBASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AC011467.4-201ENST00000594891 528 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms