Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF31Q96EP0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF31Q96EP0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
RNF31Q96EP0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF31Q96EP0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 RBM17P3-201ENST00000417687 1192 ntBASIC16.89■□□□□ 0.29
RNF31Q96EP0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 AC098831.1-202ENST00000438821 336 ntBASIC16.89■□□□□ 0.29
RNF31Q96EP0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 TERC-201ENST00000602385 541 ntBASIC16.89■□□□□ 0.29
RNF31Q96EP0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF31Q96EP0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF31Q96EP0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 AC009053.2-201ENST00000563701 2365 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 SCARNA2-201ENST00000458748 420 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 OR7E14P-202ENST00000530490 1290 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 AC106730.1-201ENST00000566722 1090 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 MTDHP4-201ENST00000600287 670 ntBASIC16.88■□□□□ 0.29
RNF31Q96EP0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF31Q96EP0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF31Q96EP0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 PMS2P1-201ENST00000431037 1228 ntBASIC16.87■□□□□ 0.29
RNF31Q96EP0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 AC093010.1-201ENST00000473625 1624 ntBASIC16.87■□□□□ 0.29
RNF31Q96EP0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms