Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AC109322.1-201ENST00000524499 1264 ntBASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AL121761.2-201ENST00000598007 1648 ntBASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRNP40Q96DI7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 DDX43P3-201ENST00000441064 443 ntBASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 PAWRP1-201ENST00000451083 565 ntBASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 AC023141.5-201ENST00000458585 616 ntBASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 LINC00628-201ENST00000628516 1289 ntBASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 AC090340.1-201ENST00000620778 4980 ntBASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.66■□□□□ 0.1
SNRNP40Q96DI7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 AC005498.2-205ENST00000593218 784 ntBASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 AC092919.2-201ENST00000623631 1645 ntBASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNRNP40Q96DI7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AC244107.1-201ENST00000442033 332 ntBASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 FAM185BP-201ENST00000443595 716 ntBASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 FAM86GP-201ENST00000448322 971 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms