Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF25Q96BH1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF25Q96BH1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 AL118508.1-201ENST00000613502 2345 ntBASIC18.44■□□□□ 0.54
RNF25Q96BH1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 AC063952.2-201ENST00000498792 1227 ntBASIC18.44■□□□□ 0.54
RNF25Q96BH1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF25Q96BH1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF25Q96BH1 BX276092.7-203ENST00000637198 1536 ntBASIC18.44■□□□□ 0.54
RNF25Q96BH1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 RN7SL850P-201ENST00000579959 291 ntBASIC18.43■□□□□ 0.54
RNF25Q96BH1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 AC083849.1-201ENST00000615227 514 ntBASIC18.43■□□□□ 0.54
RNF25Q96BH1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF25Q96BH1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF25Q96BH1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms