Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC026150.2-201ENST00000564693 1156 ntBASIC17.33■□□□□ 0.36
CLDN23Q96B33 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN23Q96B33 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN23Q96B33 AIRN-201ENST00000601203 4374 ntBASIC17.33■□□□□ 0.36
CLDN23Q96B33 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 AC008677.1-201ENST00000519230 1561 ntBASIC17.32■□□□□ 0.36
CLDN23Q96B33 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 CR383656.12-201ENST00000549567 513 ntBASIC17.32■□□□□ 0.36
CLDN23Q96B33 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN23Q96B33 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN23Q96B33 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 SPDYE14P-201ENST00000442619 822 ntBASIC17.31■□□□□ 0.36
CLDN23Q96B33 AP005018.1-201ENST00000525475 301 ntBASIC17.31■□□□□ 0.36
CLDN23Q96B33 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 AL390754.1-201ENST00000619088 582 ntBASIC17.31■□□□□ 0.36
CLDN23Q96B33 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN23Q96B33 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN23Q96B33 AC046185.3-201ENST00000623228 1824 ntBASIC17.31■□□□□ 0.36
CLDN23Q96B33 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 CRB3P1-201ENST00000449338 276 ntBASIC17.3■□□□□ 0.36
CLDN23Q96B33 IGHV3-62-201ENST00000520057 340 ntBASIC17.3■□□□□ 0.36
CLDN23Q96B33 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 AL358472.5-202ENST00000641448 1267 ntBASIC17.3■□□□□ 0.36
CLDN23Q96B33 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms