Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.43■■□□□ 1.02
RPGRQ92834 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RPGRQ92834 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.42■■□□□ 1.02
RPGRQ92834 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RPGRQ92834 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RPGRQ92834 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 BCRP1-201ENST00000444246 691 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.42■■□□□ 1.02
RPGRQ92834 PAWRP1-201ENST00000451083 565 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.42■■□□□ 1.02
RPGRQ92834 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 AL096865.1-201ENST00000606796 927 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RPGRQ92834 AP000974.1-201ENST00000623909 2387 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 LINC00628-201ENST00000628516 1289 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 HCG11-201ENST00000411553 5696 ntBASIC21.42■■□□□ 1.02
RPGRQ92834 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPGRQ92834 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.41■■□□□ 1.02
RPGRQ92834 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.41■■□□□ 1.02
RPGRQ92834 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.41■■□□□ 1.02
RPGRQ92834 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 KRT18P55-202ENST00000578578 1546 ntBASIC21.41■■□□□ 1.02
RPGRQ92834 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 AL035633.1-201ENST00000406139 838 ntBASIC21.41■■□□□ 1.02
RPGRQ92834 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.41■■□□□ 1.02
RPGRQ92834 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.41■■□□□ 1.02
RPGRQ92834 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.41■■□□□ 1.02
RPGRQ92834 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPGRQ92834 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPGRQ92834 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RPGRQ92834 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPGRQ92834 AC002056.1-201ENST00000395613 760 ntBASIC21.4■■□□□ 1.02
RPGRQ92834 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.4■■□□□ 1.02
RPGRQ92834 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.4■■□□□ 1.02
RPGRQ92834 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.4■■□□□ 1.02
RPGRQ92834 TIMM8BP1-201ENST00000452384 211 ntBASIC21.4■■□□□ 1.02
RPGRQ92834 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
RPGRQ92834 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
RPGRQ92834 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.4■■□□□ 1.02
RPGRQ92834 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.4■■□□□ 1.02
RPGRQ92834 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.4■■□□□ 1.02
RPGRQ92834 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.4■■□□□ 1.02
RPGRQ92834 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.4■■□□□ 1.02
RPGRQ92834 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPGRQ92834 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPGRQ92834 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.39■■□□□ 1.02
RPGRQ92834 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPGRQ92834 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
RPGRQ92834 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RPGRQ92834 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPGRQ92834 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
RPGRQ92834 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RPGRQ92834 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.39■■□□□ 1.01
RPGRQ92834 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.39■■□□□ 1.01
RPGRQ92834 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPGRQ92834 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPGRQ92834 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPGRQ92834 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPGRQ92834 FAM86GP-201ENST00000448322 971 ntBASIC21.39■■□□□ 1.01
RPGRQ92834 SLC25A6P2-201ENST00000497974 877 ntBASIC21.39■■□□□ 1.01
RPGRQ92834 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RPGRQ92834 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.39■■□□□ 1.01
RPGRQ92834 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RPGRQ92834 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
RPGRQ92834 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.39■■□□□ 1.01
RPGRQ92834 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.39■■□□□ 1.01
RPGRQ92834 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms