Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC3Q92529 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC3Q92529 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC3Q92529 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC3Q92529 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC3Q92529 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC3Q92529 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC3Q92529 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHC3Q92529 AC022211.2-201ENST00000585075 2527 ntBASIC18.64■□□□□ 0.57
SHC3Q92529 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 PRORSD1P-202ENST00000563365 2154 ntBASIC18.64■□□□□ 0.57
SHC3Q92529 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC3Q92529 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.64■□□□□ 0.57
SHC3Q92529 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC3Q92529 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
SHC3Q92529 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.64■□□□□ 0.57
SHC3Q92529 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC3Q92529 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC3Q92529 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
SHC3Q92529 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.64■□□□□ 0.57
SHC3Q92529 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.64■□□□□ 0.57
SHC3Q92529 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SHC3Q92529 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SHC3Q92529 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SHC3Q92529 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC3Q92529 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHC3Q92529 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC3Q92529 AL135999.2-201ENST00000622438 1686 ntBASIC18.63■□□□□ 0.57
SHC3Q92529 LINC02012-201ENST00000608206 1725 ntBASIC18.63■□□□□ 0.57
SHC3Q92529 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 HTR7P1-202ENST00000624664 4411 ntBASIC18.63■□□□□ 0.57
SHC3Q92529 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC3Q92529 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC3Q92529 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHC3Q92529 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC3Q92529 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
SHC3Q92529 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC3Q92529 MIR5100-201ENST00000579544 119 ntBASIC18.63■□□□□ 0.57
SHC3Q92529 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC3Q92529 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHC3Q92529 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.63■□□□□ 0.57
SHC3Q92529 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC3Q92529 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHC3Q92529 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC3Q92529 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SHC3Q92529 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC3Q92529 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC3Q92529 NUS1P2-201ENST00000417358 873 ntBASIC18.62■□□□□ 0.57
SHC3Q92529 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SHC3Q92529 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC3Q92529 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC3Q92529 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.62■□□□□ 0.57
SHC3Q92529 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHC3Q92529 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC3Q92529 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms