Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC44A1Q8WWI5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 MIR662-201ENST00000384847 95 ntBASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 AC092597.1-201ENST00000487352 616 ntBASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC44A1Q8WWI5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 AC211429.1-201ENST00000415277 523 ntBASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 SLC25A3P1-201ENST00000443844 931 ntBASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 COX11P1-201ENST00000489116 835 ntBASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC44A1Q8WWI5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 ZNF444P1-201ENST00000559497 298 ntBASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC44A1Q8WWI5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms