Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 AP005117.1-201ENST00000584346 1413 ntBASIC18.71■□□□□ 0.59
LMO3Q8TAP4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
LMO3Q8TAP4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LMO3Q8TAP4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
LMO3Q8TAP4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 MIR3652-201ENST00000579335 131 ntBASIC18.7■□□□□ 0.58
LMO3Q8TAP4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 AC079776.2-201ENST00000641154 1609 ntBASIC18.7■□□□□ 0.58
LMO3Q8TAP4 AD000864.1-201ENST00000624076 2295 ntBASIC18.7■□□□□ 0.58
LMO3Q8TAP4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LMO3Q8TAP4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 TSPY19P-201ENST00000418461 509 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AL020989.1-201ENST00000422979 469 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 TSPY18P-201ENST00000441642 509 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AC106795.1-205ENST00000512851 1056 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AC004817.3-201ENST00000602957 2129 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 AL121761.2-201ENST00000598007 1648 ntBASIC18.69■□□□□ 0.58
LMO3Q8TAP4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO3Q8TAP4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 AL732292.2-201ENST00000609649 430 ntBASIC18.68■□□□□ 0.58
LMO3Q8TAP4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMO3Q8TAP4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms