Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM48Q8IWZ4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AC093909.1-201ENST00000504731 1122 ntBASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AP001005.1-201ENST00000571755 1248 ntBASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AL139288.1-201ENST00000623748 933 ntBASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 NFIC-211ENST00000641145 8399 ntBASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM48Q8IWZ4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 KRT18P55-202ENST00000578578 1546 ntBASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 AC135050.7-201ENST00000624508 2218 ntBASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM48Q8IWZ4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 BICD1-207ENST00000551848 1962 ntBASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 RPS2P28-201ENST00000314255 741 ntBASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms