Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AC125634.1-201ENST00000438758 1403 ntBASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 SLC25A1P3-201ENST00000395415 828 ntBASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 LINC01238-205ENST00000567549 1107 ntBASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AC109462.3-201ENST00000573934 613 ntBASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CCDC83Q8IWF9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 AC106886.4-201ENST00000623557 2502 ntBASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC83Q8IWF9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 AL136038.3-201ENST00000561909 1096 ntBASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 AL353801.3-201ENST00000609898 542 ntBASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 IGHV3-41-201ENST00000613121 348 ntBASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 AC046185.3-201ENST00000623228 1824 ntBASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC83Q8IWF9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms