Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 AC023141.5-201ENST00000458585 616 ntBASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 STK19B-204ENST00000512515 211 ntBASIC18.86■□□□□ 0.61
HERC6Q8IVU3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 STK25P1-201ENST00000585406 838 ntBASIC18.86■□□□□ 0.61
HERC6Q8IVU3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 LINC00628-201ENST00000628516 1289 ntBASIC18.86■□□□□ 0.61
HERC6Q8IVU3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 DDX43P3-201ENST00000441064 443 ntBASIC18.85■□□□□ 0.61
HERC6Q8IVU3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 FAM86GP-201ENST00000448322 971 ntBASIC18.85■□□□□ 0.61
HERC6Q8IVU3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 CXCL1P1-201ENST00000502804 216 ntBASIC18.85■□□□□ 0.61
HERC6Q8IVU3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.85■□□□□ 0.61
HERC6Q8IVU3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 LINC00982-205ENST00000420957 435 ntBASIC18.84■□□□□ 0.61
HERC6Q8IVU3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.84■□□□□ 0.61
HERC6Q8IVU3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERC6Q8IVU3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERC6Q8IVU3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms