Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 AL024508.2-201ENST00000607749 1894 ntBASIC16.42■□□□□ 0.22
CCDC71Q8IV32 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 KRT8P10-201ENST00000450021 1447 ntBASIC16.42■□□□□ 0.22
CCDC71Q8IV32 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC71Q8IV32 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 AC132938.6-201ENST00000623828 1655 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TSPY19P-201ENST00000418461 509 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TSPY18P-201ENST00000441642 509 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 AC091304.2-201ENST00000564639 760 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 AL121772.3-201ENST00000610840 674 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 IGHV3-41-201ENST00000613121 348 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 AC105020.1-201ENST00000435356 2205 ntBASIC16.41■□□□□ 0.22
CCDC71Q8IV32 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71Q8IV32 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 PCDH8P1-201ENST00000428983 2773 ntBASIC16.4■□□□□ 0.22
CCDC71Q8IV32 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71Q8IV32 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms