Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 RCC2P3-201ENST00000418112 1537 ntBASIC12.59□□□□□ -0.39
NFE4Q86UQ8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.59□□□□□ -0.39
NFE4Q86UQ8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 CR769767.2-201ENST00000622735 460 ntBASIC12.59□□□□□ -0.39
NFE4Q86UQ8 AL023973.1-201ENST00000624619 620 ntBASIC12.59□□□□□ -0.39
NFE4Q86UQ8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.59□□□□□ -0.39
NFE4Q86UQ8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NFE4Q86UQ8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.58□□□□□ -0.39
NFE4Q86UQ8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
NFE4Q86UQ8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
NFE4Q86UQ8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
NFE4Q86UQ8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.58□□□□□ -0.4
NFE4Q86UQ8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 AL023284.2-201ENST00000405850 579 ntBASIC12.58□□□□□ -0.4
NFE4Q86UQ8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 AL121956.5-201ENST00000625261 221 ntBASIC12.58□□□□□ -0.4
NFE4Q86UQ8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.58□□□□□ -0.4
NFE4Q86UQ8 AC133963.1-201ENST00000504166 1679 ntBASIC12.57□□□□□ -0.4
NFE4Q86UQ8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 AL355312.1-201ENST00000407115 2176 ntBASIC12.57□□□□□ -0.4
NFE4Q86UQ8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NFE4Q86UQ8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms