Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CCR12P-201ENST00000446203 998 ntBASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ATP5G1P1-201ENST00000448724 379 ntBASIC15.32■□□□□ 0.04
C11orf88Q6PI97 AC011506.1-201ENST00000474329 610 ntBASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 KRT8P9-201ENST00000558927 1449 ntBASIC15.32■□□□□ 0.04
C11orf88Q6PI97 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TERF1P1-201ENST00000311003 1181 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 AL390955.1-201ENST00000428694 934 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 PRSS44-201ENST00000515154 1146 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 AC011298.2-201ENST00000617989 482 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 GMCL1P1-201ENST00000463439 1581 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf88Q6PI97 PCDHB19P-201ENST00000570871 2371 ntBASIC15.31■□□□□ 0.04
C11orf88Q6PI97 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 AP000593.1-201ENST00000393668 712 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 CRYGFP-201ENST00000418459 633 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 SLC25A1P2-201ENST00000430693 912 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 CYP2D8P-201ENST00000433633 1490 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 LINC01238-205ENST00000567549 1107 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 AL512604.3-201ENST00000569583 964 ntBASIC15.3■□□□□ 0.04
C11orf88Q6PI97 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms