Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNKSR3Q6P9H4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 INGX-202ENST00000489074 768 ntBASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 AC051619.7-201ENST00000568314 623 ntBASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.67■□□□□ 0.58
CNKSR3Q6P9H4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 BASP1P1-201ENST00000430708 665 ntBASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AC243562.1-201ENST00000560672 389 ntBASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AP001059.3-201ENST00000619053 235 ntBASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNKSR3Q6P9H4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC055876.3-201ENST00000431496 288 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC107918.2-201ENST00000530817 355 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AL135744.1-201ENST00000565098 629 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 RARRES2P8-201ENST00000566335 367 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC138649.4-201ENST00000612222 287 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 AKAP8P1-201ENST00000434743 1349 ntBASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR3Q6P9H4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.64■□□□□ 0.58
CNKSR3Q6P9H4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CNKSR3Q6P9H4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNKSR3Q6P9H4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CNKSR3Q6P9H4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 FAM58DP-201ENST00000428076 619 ntBASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms