Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AC105036.2-201ENST00000569468 176 ntBASIC13.25□□□□□ -0.29
MRPL54Q6P161 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 AC133552.2-202ENST00000575694 574 ntBASIC13.25□□□□□ -0.29
MRPL54Q6P161 AC004264.1-201ENST00000608354 794 ntBASIC13.25□□□□□ -0.29
MRPL54Q6P161 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 NBPF21P-201ENST00000425093 1451 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 PRKY-204ENST00000533551 1019 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 LINC01451-201ENST00000623792 534 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 RNF216P1-203ENST00000404404 2427 ntBASIC13.24□□□□□ -0.29
MRPL54Q6P161 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.24□□□□□ -0.29
MRPL54Q6P161 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MRPL54Q6P161 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms