Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTC1Q2NKJ3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 AL139400.1-201ENST00000366220 510 ntBASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 BCRP1-201ENST00000444246 691 ntBASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 MIR4751-201ENST00000578027 74 ntBASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 AC093028.1-201ENST00000622998 982 ntBASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CTC1Q2NKJ3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 AC010460.3-201ENST00000511359 1579 ntBASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTC1Q2NKJ3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 TSEN15P1-201ENST00000423257 515 ntBASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 PDPK2P-202ENST00000562415 1191 ntBASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 AC079416.2-201ENST00000625035 1193 ntBASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.65■□□□□ 0.58
CTC1Q2NKJ3 AC073592.3-201ENST00000625118 1834 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms