Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 Z99916.2-201ENST00000604037 246 ntBASIC14.29□□□□□ -0.12
SPCS3P61009 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SPCS3P61009 REXO1L11P-201ENST00000620964 1927 ntBASIC14.29□□□□□ -0.12
SPCS3P61009 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.28□□□□□ -0.12
SPCS3P61009 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SPCS3P61009 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SPCS3P61009 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 MIR718-201ENST00000390190 70 ntBASIC14.28□□□□□ -0.12
SPCS3P61009 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.28□□□□□ -0.12
SPCS3P61009 AL390955.1-201ENST00000428694 934 ntBASIC14.28□□□□□ -0.12
SPCS3P61009 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 AC009947.2-201ENST00000444014 672 ntBASIC14.28□□□□□ -0.12
SPCS3P61009 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.28□□□□□ -0.12
SPCS3P61009 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SPCS3P61009 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 NEK4P2-201ENST00000580004 1012 ntBASIC14.28□□□□□ -0.12
SPCS3P61009 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 AC011676.5-201ENST00000624864 2660 ntBASIC14.28□□□□□ -0.12
SPCS3P61009 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.28□□□□□ -0.12
SPCS3P61009 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPCS3P61009 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPCS3P61009 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SPCS3P61009 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SPCS3P61009 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SPCS3P61009 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.27□□□□□ -0.12
SPCS3P61009 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.27□□□□□ -0.12
SPCS3P61009 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.27□□□□□ -0.12
SPCS3P61009 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 AC023824.1-201ENST00000562945 2975 ntBASIC14.27□□□□□ -0.12
SPCS3P61009 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.27□□□□□ -0.12
SPCS3P61009 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SPCS3P61009 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.27□□□□□ -0.12
SPCS3P61009 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPCS3P61009 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.27□□□□□ -0.13
SPCS3P61009 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
SPCS3P61009 KRT18P65-201ENST00000439811 1286 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms