Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
MCCD1P59942 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 NCF1C-201ENST00000438382 1427 ntBASIC18.66■□□□□ 0.58
MCCD1P59942 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MCCD1P59942 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
MCCD1P59942 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MCCD1P59942 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.66■□□□□ 0.58
MCCD1P59942 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.66■□□□□ 0.58
MCCD1P59942 AC021087.4-201ENST00000563761 564 ntBASIC18.66■□□□□ 0.58
MCCD1P59942 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MCCD1P59942 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.66■□□□□ 0.58
MCCD1P59942 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MCCD1P59942 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MCCD1P59942 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
MCCD1P59942 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MCCD1P59942 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MCCD1P59942 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.65■□□□□ 0.58
MCCD1P59942 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
MCCD1P59942 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 PRORSD1P-202ENST00000563365 2154 ntBASIC18.65■□□□□ 0.58
MCCD1P59942 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.65■□□□□ 0.58
MCCD1P59942 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.65■□□□□ 0.58
MCCD1P59942 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.65■□□□□ 0.58
MCCD1P59942 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.65■□□□□ 0.58
MCCD1P59942 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.65■□□□□ 0.58
MCCD1P59942 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.65■□□□□ 0.58
MCCD1P59942 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.65■□□□□ 0.58
MCCD1P59942 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.65■□□□□ 0.58
MCCD1P59942 MTDHP4-201ENST00000600287 670 ntBASIC18.65■□□□□ 0.58
MCCD1P59942 AL139424.1-201ENST00000607572 797 ntBASIC18.65■□□□□ 0.58
MCCD1P59942 AL691432.3-201ENST00000621860 400 ntBASIC18.65■□□□□ 0.58
MCCD1P59942 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MCCD1P59942 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MCCD1P59942 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
MCCD1P59942 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MCCD1P59942 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
MCCD1P59942 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MCCD1P59942 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MCCD1P59942 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MCCD1P59942 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.64■□□□□ 0.57
MCCD1P59942 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.64■□□□□ 0.57
MCCD1P59942 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.64■□□□□ 0.57
MCCD1P59942 KRT18P27-201ENST00000427733 1299 ntBASIC18.64■□□□□ 0.57
MCCD1P59942 SCARNA2-201ENST00000458748 420 ntBASIC18.64■□□□□ 0.57
MCCD1P59942 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MCCD1P59942 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MCCD1P59942 AC104692.2-201ENST00000603054 253 ntBASIC18.64■□□□□ 0.57
MCCD1P59942 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.64■□□□□ 0.57
MCCD1P59942 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.64■□□□□ 0.57
MCCD1P59942 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 AC080080.1-201ENST00000625121 2420 ntBASIC18.64■□□□□ 0.57
MCCD1P59942 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MCCD1P59942 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 AC060834.1-201ENST00000443027 2032 ntBASIC18.64■□□□□ 0.57
MCCD1P59942 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MCCD1P59942 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MCCD1P59942 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms