Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 AC132938.5-201ENST00000624980 1813 ntBASIC17.68■□□□□ 0.42
WNT3AP56704 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
WNT3AP56704 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.68■□□□□ 0.42
WNT3AP56704 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.68■□□□□ 0.42
WNT3AP56704 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.68■□□□□ 0.42
WNT3AP56704 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.68■□□□□ 0.42
WNT3AP56704 MIR3652-201ENST00000579335 131 ntBASIC17.68■□□□□ 0.42
WNT3AP56704 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
WNT3AP56704 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.68■□□□□ 0.42
WNT3AP56704 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.68■□□□□ 0.42
WNT3AP56704 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
WNT3AP56704 AC046185.3-201ENST00000623228 1824 ntBASIC17.68■□□□□ 0.42
WNT3AP56704 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.68■□□□□ 0.42
WNT3AP56704 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
WNT3AP56704 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
WNT3AP56704 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.67■□□□□ 0.42
WNT3AP56704 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 FOSL1P1-201ENST00000511041 816 ntBASIC17.67■□□□□ 0.42
WNT3AP56704 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.67■□□□□ 0.42
WNT3AP56704 AC073592.5-201ENST00000624854 528 ntBASIC17.67■□□□□ 0.42
WNT3AP56704 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
WNT3AP56704 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
WNT3AP56704 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
WNT3AP56704 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
WNT3AP56704 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.67■□□□□ 0.42
WNT3AP56704 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
WNT3AP56704 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
WNT3AP56704 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.66■□□□□ 0.42
WNT3AP56704 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 KRT16P4-201ENST00000453883 522 ntBASIC17.66■□□□□ 0.42
WNT3AP56704 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
WNT3AP56704 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.66■□□□□ 0.42
WNT3AP56704 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.66■□□□□ 0.42
WNT3AP56704 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 AL591684.3-201ENST00000605187 298 ntBASIC17.66■□□□□ 0.42
WNT3AP56704 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.66■□□□□ 0.42
WNT3AP56704 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.66■□□□□ 0.42
WNT3AP56704 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
WNT3AP56704 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
WNT3AP56704 PMPCAP1-201ENST00000508114 1576 ntBASIC17.66■□□□□ 0.42
WNT3AP56704 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
WNT3AP56704 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
WNT3AP56704 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
WNT3AP56704 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
WNT3AP56704 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
WNT3AP56704 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.65■□□□□ 0.42
WNT3AP56704 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
WNT3AP56704 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
WNT3AP56704 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
WNT3AP56704 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms